SNOMED CT Templates

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StatusIn PROD
Version

1.0

Descriptions:

Termdescription typeLanguage/acceptabilityLanguage/acceptabilityCase significance

[course] [periods of life] arthritis of [joint body structure] caused by [organism] (disorder)

FSNus:Pgb:Pci

[course] [periods of life] arthritis of [joint body structure] caused by [organism]

SYNus:Pgb:Pci


Concept model:

Attribute cardinalityAttributeValuerole group numberRole group cardinality
1..*

116680003 |Is a (attribute)|

64572001 |Disease (disorder)|

0N/A
0..1

263502005 |Clinical course (attribute)|

<  288524001 |Courses (qualifier value)|

00..1
1..1

116676008 |Associated morphology (attribute)|

<<  409774005 |Inflammatory morphology (morphologic abnormality)|

11..*
@rolegroup

1..1

363698007 |Finding site (attribute)|

<<  39352004 |Joint structure (body structure)|

1
0..1

246075003 |Causative agent (attribute)|

1
0..1

246454002 |Occurrence (attribute)|

<  282032007 |Periods of life (qualifier value)|

1
0..1

370135005 |Pathological process (attribute)|

< 308489006 |Pathological process (qualifier value)|

1

Definition status:  


900000000000073002 |Defined (core metadata concept)|

Applies to

<< 3723001 |Arthritis (disorder)|

Template Language

64572001 |Disease (disorder)|  : [[~0..1]]  263502005 |Clinical course (attribute)|  = [[ +id (<  288524001 |Courses (qualifier value)|  ) @course]] , [[~1..* @rolegroup]]{ [[~1..1]]  116676008 |Associated morphology (attribute)|  = [[+id(<<  409774005 |Inflammatory morphology (morphologic abnormality)| ) @morphology ]], [[~1..1]]  363698007 |Finding site (attribute)|  = [[+id(<<  39352004 |Joint structure (body structure)|  )]], [[~0..1]]  246454002 |Occurrence (attribute)|  = [[ +id(<  282032007 |Periods of life (qualifier value)|  ) @occur]], [[~0..1]]  370135005 |Pathological process (attribute)|  = [[ +id ( <  308489006 |Pathological process (qualifier value)|  ) @proc]], [[~0..1]]  246075003 |Causative agent (attribute)|  = [[ +id (<  410607006 |Organism (organism)|  OR <  105590001 |Substance (substance)|  ) @causative]] }

Link to misalignment reports:

Iterations:

Rules for generating descriptions:

  1. Apply General rules for generating descriptions for templates
  2. Apply Enhancements for the Template Language
  3. Replace [morphology] by the word 'infection' if associated morphology is absent; 
  4. Replace [morphology] by the word 'infection' if associated morphology is 409774005|Inflammatory morphology (morphologic abnormality)| or 23583003|Inflammation (morphologic abnormality)|. 

JIRA ticket:

QI-58 - Getting issue details... STATUS

INFRA-3309 - Getting issue details... STATUS

12 Comments

  1. Penni Hernandez

    There are concepts that require two role groups, e.g. bilateral with "left" and "right".  Should the cardinality be changed for the role group to 1..* ?  Changed to 1..2

  2. Jim Case

    Short answer, yes.  We will need to deal with this for any subhierarchy that has bilateral concepts.

  3. Peter G. Williams

    431236003 |Bacterial arthritis of sacroiliac joint (disorder)| is an example of a concept with an Organism as a causative agent rather than a substance.   That seems reasonable to me; I'll add and re-run, and if you disagree please let me know.    Penni Hernandez Yongsheng Gao

  4. Penni Hernandez

    I agree

  5. Yongsheng Gao

    Penni Hernandez  I think the use of attribute 'interprets' in this template needs to be reviewed. Two concepts modelled by 'interprets' are phrased as co-occurrent and due to. I suggest to exclude it from the template. 

    1. Jim Case

      I do not recall the proposed use case for INTERPRETS here in the template, but for disorders the INTERPRETS/HAS INTERPRETATION should be used only to provide supporting evidence for the presence of the disorder.  It should be used sparingly and usually only when there is a difference in how the disorder is viewed clinically based on the observable.

  6. Penni Hernandez

    If kept it should be role group 0

  7. Penni Hernandez

    I removed the "interprets" I believe I have run the template language report without the interprets and there were no concepts that fell out due to this missing.

  8. Yongsheng Gao

    Cheers Penni Hernandez  Change it to ready for implementation.

  9. Penni Hernandez

    The template language and the table don't align on the role groups, template language has 1..2 and the table has 1..*

  10. Bruce Goldberg

    Can an optional due to [disease] relationship be added to this template to incorporate e.g.  ?


    Arthritis secondary to amyloidosis (disorder)
    Arthritis secondary to hematological malignancy (disorder)
    Arthritis secondary to malignancy (disorder)
    Arthritis secondary to non-hematological malignancy (disorder)

  11. Jim Case

    Makes sense as we have a substantial number of secondary arthritis concepts.