Allergy to [substance] (finding) - v2.0

Descriptions:

Concept model:

Definition status:  

900000000000073002 |Defined (core metadata concept)|

Applies to:

<<  419199007 |Allergy to substance (disorder)|

Template language

419199007 |Allergy to substance (finding)|  : [[~1..1 @rolegroup]] { [[~1..1]]  719722006 |Has realization (attribute)|  =  472964009 |Allergic process (qualifier value)| , [[~1..1]]  246075003 |Causative agent (attribute)|  = [[ +id (<<  105590001 |Substance (substance)|  ) @causative]] }

Misalignment report:

https://docs.google.com/spreadsheets/d/1CUWI2KYdfjj2MuFTLif1AzCk8BaFYpNN0738F5gJvdk/edit#gid=0

Rules for description generation:

1. Remove the semantic tag, e.g. (body structure)
2. Remove 'Structure of' from [body structure] if term starts with 'Structure of'   e.g. 709530002|Structure of phalanx of hand (body structure)|
3. Remove 'structure' from [body structure] if term contains 'structure', e.g. 69536005|Head structure (body structure)|   24097009|Bone structure of hand (body structure)|

JIRA ticket for implementation:

INFRA-2549 - Getting issue details... STATUS

Exceptions:

There are few exceptions in modeling the causative agent attribute for descendants of the 419199007 |Allergy to substance (finding)| in comparison to the general template guidelines:

• 788802000|Allergy to cetuximab (finding)|
  • The allergy is to alpha-gal substance in a product containing cetuximab.
• 432807008 |Pollen-food allergy (finding)|
  • This is a contact food allergy that occurs in patients with pollen allergy when ingesting raw fruits, vegetables and some tree nuts. Symptoms are caused by a heat-labile protein in fruits, vegetables, and nuts that cross-reacts with proteins in aeroallergens.
• 293908005 |Allergy to chloral hydrate (finding)|
  • In general, concepts in the 419199007 |Allergy to substance (finding)| sub-hierarchy are modeled with the base substance and not its modification. Chloral hydrate is an exception to this rule.

Please note that for the first two:  since it is hard to fully define these concepts, they have been left as primitive concepts.