Descriptions:
| Term | description type | Language/acceptability | Language/acceptability | Case significance |
|---|---|---|---|---|
| Anatomic location [invasion] by [primary] [neoplasm] of [body structure] in [specimen] (observable entity) | FSN | US:PT | GB:PT | ci |
| Anatomic location [invasion] by [primary] [neoplasm] of [body structure] in [specimen] | PT | US:PT | GB:PT | ci |
| Site involved by [invasion] of [primary] [neoplasm] of [body structure] | SYN | US:SYN | GB:SYN | ci |
| Tissue structure invaded by [invasion] of [primary] [neoplasm] of [body structure] | SYN | US:SYN | GB:SYN | ci |
Concept model:
| Attribute cardinality | Attribute | Value | Role group cardinality |
|---|---|---|---|
| 1..1 | N/A | ||
| 1..1 | 1..1 | ||
| 1..1 | 1..1 | ||
| 0..1 | [body structure] << 91723000 |Anatomical structure (body structure)| | 0..1 | |
| 0..1 | 0..1 | ||
| 0..1 | 0..1 | ||
| 1..1 | 1..1 | ||
| 0..1 | [specimen] << 119376003 |Tissue specimen (specimen)| | 0..1 | |
| 0..1 | 0..1 |
Definition status:
Applies to:
< 363787002 |Observable entity (observable entity)|
Template language:
363787002 |Observable entity (observable entity)|
:
[[~1..1]] {[[~1..1]] 370130000 |Property (attribute)| = [[+id( 758637006 |Anatomical location (property) (qualifier value)| )@property]]},
[[~1..1]] {[[~1..1]] 704319004 |Inheres in (attribute)| = [[+id (<< 400177003 |Neoplasm and/or hamartoma (morphologic abnormality)| ) @inheresIn]]},
[[~1..1]] {[[~1..1]] 704321009 |Characterizes (attribute)| = 1505281000004101 |Direct local invasion (qualifier value)| },
[[~0..1]] {[[~0..1]] 718497002 |Inherent location (attribute)| = [[+id (<< 91723000 |Anatomical structure (body structure)| ) @inherentLocation]]},
[[~0..1]] {[[~0..1]] 704327008 |Direct site (attribute)| = [[+id (<< 119376003 |Tissue specimen (specimen)| ) @directSite]]},
[[~0..1]] {[[~0..1]] 370132008 |Scale type (attribute)| = [[+id ( 117362005 |Nominal value (qualifier value)| ) @scaleType]]},
[[~0..1]] {[[~0..1]] 370134009 |Time aspect (attribute)| = [[+id ( 123029007 |Single point in time (qualifier value)| ) @timeAspect]]},
[[~0..1]] {[[~0..1]] 704321009 |Characterizes (attribute)| = 1234914003 |Malignant proliferation of primary neoplasm (qualifier value)| }
[[~1..1]] {[[~1..1]] 370130000 |Property (attribute)| = [[+id( 758637006 |Anatomical location (property) (qualifier value)| )@property]]},
[[~1..1]] {[[~1..1]] 704319004 |Inheres in (attribute)| = [[+id (<< 400177003 |Neoplasm and/or hamartoma (morphologic abnormality)| ) @inheresIn]]},
[[~1..1]] {[[~1..1]] 704321009 |Characterizes (attribute)| = 1505281000004101 |Direct local invasion (qualifier value)| },
[[~0..1]] {[[~0..1]] 718497002 |Inherent location (attribute)| = [[+id (<< 91723000 |Anatomical structure (body structure)| ) @inherentLocation]]},
[[~0..1]] {[[~0..1]] 704327008 |Direct site (attribute)| = [[+id (<< 119376003 |Tissue specimen (specimen)| ) @directSite]]},
[[~0..1]] {[[~0..1]] 370132008 |Scale type (attribute)| = [[+id ( 117362005 |Nominal value (qualifier value)| ) @scaleType]]},
[[~0..1]] {[[~0..1]] 370134009 |Time aspect (attribute)| = [[+id ( 123029007 |Single point in time (qualifier value)| ) @timeAspect]]},
[[~0..1]] {[[~0..1]] 704321009 |Characterizes (attribute)| = 1234914003 |Malignant proliferation of primary neoplasm (qualifier value)| }
Rules for description generation:
- Apply General rules for generating descriptions for templates
- Remove "of [body structure]" if 'Inherent location' is not included
- Remove "in [specimen]" if 'Direct site' is not included
- When Characterizes (attribute) with value 1234914003 |Malignant proliferation of primary neoplasm (qualifier value)| is included, then "primary" should be populated in the slot [primary] in the FSN and PT.JIRA ticket:
Link to aligned concepts report:
https://docs.google.com/spreadsheets/d/1DPisWhNxGVGW-m8iUS5vXJLVVrJof56NCRIRRS-WBW8/edit#gid=5
8 Comments
Nicola Ingram
Hi Scott Campbell for the Inheres in attribute target value should this be one level up to 400177003 |Neoplasm and/or hamartoma (morphologic abnormality)| in order to also include << Angiomatosis (morphologic abnormality), << Blood vessel tumor (morphologic abnormality), << Chorangioma (morphologic abnormality), << Hamartoma (morphologic abnormality), and << Lymphatic vessel tumor (morphologic abnormality).
Nicki
Scott Campbell
Thanks, Nicki. The comment is quite helpful. We discussed with pathologists on our working group call today, and they all concur with your observation. I will make template change accordingly
Nicola Ingram
Suzanne Santamaria updated ready for review (wasn't quite sure of the square brackets in the Template language as it doesn't require a +id slot ).
Suzanne Santamaria
Nicola Ingram , the new entry in the Template language needs additional square brackets:
[[~0..1]] {[[~0..1]] 704321009 |Characterizes (attribute)| = 1234914003 |Malignant proliferation of primary neoplasm (qualifier value)| }
Suzanne Santamaria
Also we may have to adjust the previous entry for Characterizes. I think it should it be 1505281000004101 |Direct local invasion (qualifier value)| only.
Nicola Ingram
Suzanne Santamaria descriptions, Template language and Rules for description generation all updated as discussed in email and comments above.
Ready for re-review.
Suzanne Santamaria
Nicola Ingram , in the template language for the invasion, I think it needs to be updated as follows since invasion is required in this particular template:
[[~1..1]] {[[~1..1]] 704321009 |Characterizes (attribute)| = 1505281000004101 |Direct local invasion (qualifier value)| },
Nicola Ingram
Will make the change Suzanne Santamaria