SNOMED CT Templates

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StatusIn progress
Version

1.1

Descriptions: 

Termdescription typeLanguage/acceptabilityLanguage/acceptabilityCase significance[
[Course] [Periods of life] [Process] [Morphology] of [Body structure] caused by [causative agent] (disorder)FSNus:Pgb:Pci
[Course] [Periods of life] [Process] [Morphology] of [Body structure] caused by [causative agent]SYNus:Pgb:Pci


Concept model:

Attribute Cardinality

AttributeValueRole Group Cardinality
1..1

116680003 |Is a (attribute)|

64572001 |Disease (disorder)|

N/A

0..1

263502005 |Clinical course (attribute)|

[Course] <   288524001 |Courses (qualifier value)|

0..1
1..1

116676008 |Associated morphology (attribute)|

[Morphology] <  49755003 |Morphologically abnormal structure (morphologic abnormality)|

1..*





1..1

363698007 |Finding site (attribute)|

[Body structure] <  442083009 |Anatomical or acquired body structure (body structure)|

0..1

246454002 |Occurrence (attribute)|

[Periods of life] <  282032007 |Periods of life (qualifier value)|

0..1

246075003 |Causative agent (attribute)|

[Causative] <<  105590001 |Substance (substance)|

1..1

370135005 |Pathological process (attribute)|

[Process] 308490002 |Pathological developmental process (qualifier value)|

0..1

363714003 |Interprets (attribute)|

<   363787002 |Observable entity (observable entity)|   

OR <   108252007 |Laboratory procedure (procedure)|   OR <   386053000 |Evaluation procedure (procedure)|



0..1
0..1

363713009 |Has interpretation (attribute)|

<   260245000 |Finding values (qualifier value)|  

Definition status:  


900000000000073002 |Defined|

Applies To:

<  64572001 |Disease (disorder)|  : { 370135005 |Pathological process (attribute)|  =  308490002 |Pathological developmental process (qualifier value)|  ,  363698007 |Finding site (attribute)|  = <  442083009 |Anatomical or acquired body structure (body structure)|  } MINUS <<  276654001 |Congenital malformation (disorder)|

Template language: 64572001 |Disease (disorder)|   : [[~0..1]]  {[[~0..1]]  263502005 |Clinical course (attribute)|   = [[ +id (<   288524001 |Courses (qualifier value)|   ) @course]] }, [[~1..* @rolegroup]]{ [[~1..1]]   116676008 |Associated morphology (attribute)|   = [[+id(<<   49755003 |Morphologically abnormal structure (morphologic abnormality)|   ) @morphology ]], [[~1..1]]   363698007 |Finding site (attribute)|   = [[+id(<   442083009 |Anatomical or acquired body structure (body structure)|   )]], [[~0..1]]   246454002 |Occurrence (attribute)|   = [[ +id(<   282032007 |Periods of life (qualifier value)|   ) @occur]], [[~0..1]]   246075003 |Causative agent (attribute)|  = [[ +id(<<  105590001 |Substance (substance)|   ) @causative agent]], [[~1..1]]   370135005 |Pathological process (attribute)|   = [[ +id (   308490002 |Pathological developmental process (qualifier value)|   ) @proc]]} AND [[~0..1 @rolegroup]] {[[~0..1]]   363714003 |Interprets (attribute)|    = [[+id(<   363787002 |Observable entity (observable entity)|  OR <   108252007 |Laboratory procedure (procedure)|   OR <  386053000 |Evaluation procedure (procedure)|   )]], [[~0..1]]    363713009 |Has interpretation (attribute)|    =  <   260245000 |Finding values (qualifier value)|   } 

Rules for description generation: 

  1. Apply General rules for generating descriptions for templates;
  2. Apply Enhancements for the Template Language;

JIRA ticket: 

Part of the larger developmental disorders QI topic:  QI-83 - Getting issue details... STATUS

INFRA-5277 - Getting issue details... STATUS


Reports:

Reports rerun to support finalisation of template. Please see QI ticket for analysis work. 

Bone development initial report: https://docs.google.com/spreadsheets/d/1aAjBDBCadWNFKtM5hiBE-KUN1hGL5gabUA6ELSQMHrY/edit?usp=sharing

Bone development misaligned report: https://docs.google.com/spreadsheets/d/1i4mMYJA39RGSryATo6i7UO3DQu98F8VZRJUX-GZq2wI/edit?usp=sharing

Tooth development initial report: https://docs.google.com/spreadsheets/d/1fxCJLeoKDvIWWqKpx6Two0b_bLf9EHOoqfKRm7rNLIU/edit?usp=sharing

Tooth development misaligned report: https://docs.google.com/spreadsheets/d/1WAhMZAwNTq3yFjAuDShD5iAt0YlVaGo1woQRIG2HMP4/edit?usp=sharing

1 Comment

  1. Peter G. Williams

    Hi Cathy Richardsonyou asked me to check over the STL here.   Looks good.   Watch out for consistency in the angle brackets.    Like in the table we've got  [Morphology] <  49755003 |Morphologically abnormal structure (morphologic abnormality)|    which would mean that 49755003 itself would not be acceptable, but in the STL we've got <<   49755003 |Morphologically abnormal structure (morphologic abnormality)|   so it would be OK there.

    The other thing is that a slot is only needed where there is a choice.   Where there is no choice, there's no need for a slot.   So the pathological process which is sort of "hard coded" can just be written like a normal expression :   [[~1..1]]   370135005 |Pathological process (attribute)|   = 308490002 |Pathological developmental process (qualifier value)|  

    The opposite situation occurred for finding values.   If you have a choice, you must have a slot!    So you want to add in the square slot brackets there and also in that element, I think we're saying you couldn't actually use "Finding values" so the STL is correct to use a single < and the table needs to be in line with that, not <<  as it is now.