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Quality Observable with Relative to

This template is used when the LOINC term involves a component and is relative to something else, such as a reference point or another component.

This template is documented in Confluence here:  Quality observable with Component and Relative to for LOINC Ratios (observable entity) - v1.0

The java implementation of this template can be found: https://github.com/IHTSDO/reporting-engine/blob/develop/script-engine/src/main/java/org/ihtsdo/termserver/scripting/pipeline/loinc/LoincTemplatedConceptWithRelative.java

Attributes



  • LOINC Property: Represents the property of the observation, such as mass concentration or presence.
  • LOINC Scale: Describes the scale type, like quantitative or qualitative.
  • LOINC Time: Indicates the time aspect of the observation, e.g., single point in time.
  • LOINC System: Specifies the direct site of the observation.
  • LOINC Method: Describes the technique used for the observation.
  • LOINC Component: Represents the specific component being measured or observed.
  • LOINC Relative To: Specifies what the observation is relative to.

LOINC Properties currently supported:  "NFr", "MFr", "CFr", "AFr", "VFr", "SFr"

Template

Model

Code Block
themeConfluence
=== 363787002 |Observable entity (observable entity)| : 
	{
		246093002 |Component (attribute)| -> 55918008 |Monocyte (cell)|, 
 		246501002 |Technique (attribute)| -> 708058007 |Flow cytometry technique (qualifier value)|, 
		246514001 |Units (attribute)| -> 415067009 |Percentage unit (qualifier value)|, 
 		370130000 |Property (attribute)| -> 118552002 |Number fraction (property) (qualifier value)|, 
 		370132008 |Scale type (attribute)| -> 30766002 |Quantitative (qualifier value)|, 
 		370134009 |Time aspect (attribute)| -> 123029007 |Single point in time (qualifier value)|, 
 		704325000 |Relative to (attribute)| -> 52501007 |Leukocyte (cell)|, 
 		704327008 |Direct site (attribute)| -> 119297000 |Blood specimen (specimen)| 
	}

Terming

Template slots are filled by taking the preferred term of the relevant value from the model and making the initial character lower case, if allowed by the case significance setting of the preferred term.

...

In the case of the example below, this results in the following terms:

  • 2198021010000113 2199641010000117 [480541010000106480621010000102] US: P , GB: P: Percentage Number fraction of monocyte to leukocyte in blood at point in time by flow cytometry (observable entity) [ci],
  • 2198031010000111 2199631010000113 [480541010000106480621010000102] US: P GB: P : Monocytes/100 leukocytes Leukocytes in Blood by Flow cytometry (FC) [CS],
  • 2198041010000115 2199651010000115 [480541010000106480621010000102] US: A Monocytes/Leukocytes FC (Bld) [CS],
  • 2199661010000118 [480621010000102] US, GB: A : Monocytes/100 leukocytesLeukocytes:NFr:Pt:Bld:Qn:Flow cytometry [CS],
  • 2199621010000110 [480621010000102] US: A Number fraction of monocyte to leukocyte in blood at point in time by flow cytometry [ci]

Examples

LOINC Term 101147-7

Loinc Parts

Part TypeLoinc LOINC Part NameLoinc LOINC Part NumMapped to Attribute Type / Value
ComponentMonocytes/100 leukocytesLP286557LP14313-68246093002 |Component (attribute)| -> 120771002 |Antibody to Trypanosoma cruzi (substance)|
Divisors100 leukocytesLeukocytesLP31960LP157588-57704325000 |Relative to (attribute)| -> 52501007 |Leukocyte (cell)|
PropertyNFrLP6838-9370130000 |Property (attribute)| -> 118552002 |Number fraction (property) (qualifier value)|
TimePtLP6960-1370134009 |Time aspect (attribute)| -> 123029007 |Single point in time (qualifier value)|
SystemBldLP7057-5704327008 |Direct site (attribute)| -> 119297000 |Blood specimen (specimen)|
ScaleQnLP7753-9370132008 |Scale type (attribute)| -> 30766002 |Quantitative (qualifier value)|
MethodFlow cytometryLP6274-7246501002 |Technique (attribute)| -> 708058007 |Flow cytometry technique (qualifier value)|

...