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Date

20220731

Document Version

1.0

Release Status

PRODUCTION

 © 2024 International Health Terminology Standards Development Organisation. All rights reserved. SNOMED CT® was originally created by the College of American Pathologists.

This document forms part of the GP/FP SNOMED CT® Production package distributed by International Health Terminology Standards Development Organisation, trading as SNOMED International, and is subject to the SNOMED CT® Affiliate License, details of which may be found at https://www.snomed.org/snomed-ct/get-snomed

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Access within SNOMED International member countries is provided by the national release centre in each country, via the relevant Member page(linked).







Page At A Glance

1 Introduction

The SNOMED CT International General/Family Practice Reasons for Encounter and/or Health Issues reference set (hereafter called the GP/FP Subset) was developed between 2010 and 2013 by the GP/FP Subset and ICPC mapping project group. This project ended on December 31, 2013 after field-testing of the products was completed. Initial releases were accompanied by a map from the subset to ICPC-2, but a review in late 2017 about usage of this product and outreach to the user community (Members, vendors and Wonca) indicated that the map product was not used in electronic systems.  Bearing this in mind, and the fact that ICPC-3 was in development (and since released in December 2020 (https://www.icpc-3.info/)) meaning that ICPC-2 was no longer being updated, a decision was taken jointly with Wonca to deprecate the map.  As from the July 2019 version, therefore, the GP/FP release has no longer included active map records for ICPC-2.


2. Background

In December 2009 a harmonization agreement was finalized between SNOMED International and the World organisation of Family Doctors (Wonca) to promote co-operation and collaboration between the two organisations. 

This agreement led to the formation of the International Family Physician/General Practitioner Special Interest Group (IFP/GP SIG) under the auspices of SNOMED International. The IFP/GP SIG was established to propose content for SNOMED CT® related to general/family practice and to provide quality assurance for SNOMED CT content from the general/family practice perspective. SNOMED International's existing Primary Care Special Interest Group was converted to the IFP/GP SIG after the agreement was signed. 

The subset was released as 2 distinct subsets as a candidate baseline in April 2014 - Reasons for Encounter and Health Issues. Based on feedback and advice of the project group, the 2 subsets were consequently amalgamated in to a single subset.   

3 Release content

3.1 Changes to the July 2022 release GP/FP subset

As a result of changes to the July 2022 release of SNOMED CT, 25 concepts were inactivated. The following table lists those concepts that were inactivated in the July 2022 release hence removed from the refset.

Some target replacements were in the Refset and some were new to the Refset but not necessarily new to SNOMED CT.  See Column E for details. 

When a concept is inactivated as Ambiguous, more than one concept may be selected as replacement therefore not a 1:1 match between inactivated and replaced. There were 22 new concepts added to the refset as replacements. 

Inactive SCTIDInactive FSNReplacement SCT IDReplacement FSNColumn E
16001004Otalgia (finding)301354004Pain of ear (finding)New refset member
17338001Ventricular premature beats (disorder)251176006Multiple premature ventricular complexes (disorder)New refset member
179390003Therapeutic arthroscopic operations on cavity of knee joint (procedure)281811000Arthroscopic surgical procedure on knee (procedure)New refset member
182816009Therapeutic prescription (situation)16076005 Prescription (procedure)New refset member
189164002Cerebral meningioma (disorder)302820008Intracranial meningioma (disorder)New refset member
232346004Allergy to cat dander (finding)1208807009Allergy to Felis catus protein (finding)New refset member
237821001Hermaphroditism (disorder)1234907000Ovotesticular disorder of sex development (disorder)New refset member
239796000Juvenile chronic arthritis (disorder)410502007Juvenile idiopathic arthritis (disorder)Existing refset member
248224004Muzzy headed (finding)40917007Clouded consciousness (finding)Existing refset member
253205005Congenital blocked tear duct (disorder)95508001Congenital obstruction of lacrimal canaliculus (disorder)New refset member
267611002Degeneration of macula and posterior pole (disorder)737273002Degeneration of posterior pole of eye (disorder)New refset member
267611002Degeneration of macula and posterior pole (disorder)422338006Degenerative disorder of macula (disorder)Existing refset member
274666009Face ache (finding)95668009Pain in face (finding)Existing refset member
274746007Localized swelling, mass and lump, multiple sites (finding)65124004Swelling (finding)Existing refset member
274746007Localized swelling, mass and lump, multiple sites (finding)300862005Mass of body region (finding)New refset member
274746007Localized swelling, mass and lump, multiple sites (finding)248528002Multiple lumps (finding)Existing refset member
27720003Dermatitis factitia (disorder)402737007Artefactual skin disease (disorder)New refset member
30140009Enteritis presumed infectious (disorder)1193754000Inflammation of intestine presumed infectious (disorder)New refset member
30140009Enteritis presumed infectious (disorder)1193753006Inflammation of small intestine presumed infectious (disorder)New refset member
301813003Irritable hip (disorder)301864002Transient synovitis of hip (disorder)New refset member
307413004Transient memory loss (finding)162200009Temporary loss of memory (finding)New refset member
33339001Psoriasis with arthropathy (disorder)156370009Psoriatic arthritis (disorder)New refset member
33693007Compensation neurosis (disorder)192527004Elaboration of physical symptoms for psychological reasons (disorder)New refset member
399912005Pressure ulcer (disorder)1163215007Pressure injury (disorder)New refset member
409066002Education, guidance and counseling (procedure)409073007Education (procedure)Existing refset member
409066002Education, guidance and counseling (procedure)409063005Counseling (procedure)Existing refset member
42344001Psychosis caused by ingestible alcohol (disorder)1231846001Psychosis caused by ethanol (disorder)New refset member
53438000Radiation therapy procedure or service (procedure)108290001Radiation oncology AND/OR radiotherapy (procedure)Existing refset member
65046005Infertility therapy (procedure)773261007Procedure related to reproduction (procedure)New refset member
65046005Infertility therapy (procedure)702599003Counseling for infertility (procedure)New refset member
69031006Excision of breast tissue (procedure)1231734007Excision of breast (procedure)New refset member

3.2 Overview of the GP/FP subset


The GP/FP subset contains SNOMED CT concepts relating to two semantic data types commonly used in general/family practice electronic health records:

  • Reasons For Encounter (RFEs)
  • Health Issues

A 'Reason for encounter' was defined by the project group as:


"An agreed statement of the reason(s) why a person enters the health care system, representing the demand for care by that person. The terms written down and later classified by the provider clarify the reason for encounter and consequently the patient's demand for care without interpreting it in the form of a diagnosis. The reason for encounter should be recognized by the patient as an acceptable description of the demand for care" (WONCA Dictionary of General/Family Practice, 2003). 


A 'Health issue' was defined by the project group as:


"An Issue related to the health of a subject of care, as identified or stated by a specific health care party". This is further defined in the notes as "according to this definition, a health issue can correspond to a health problem, a disease, an illness" (Health Informatics – System of concepts to support continuity of care – Part 1: basic concepts (CEN/ISO FDIS 13940-1)). 

These definitions were used to define the scope of the GP/FP subset. The subset contains SNOMED CT concepts that represent terms commonly used to populate these semantic data types. 
The content of the subset covers the following:

    • Symptoms and signs
    • Disorders and diseases
    • Results
    • Family history
    • Allergies
    • Adverse drug reactions
    • Processes and procedures
    • Social history

Details on the development of the subset are available on request from info@snomed.org


4 General information about the GP/FP subset

Subsets act as the extensibility mechanism in SNOMED CT, allowing developers and users to customize SNOMED CT content to meet specific use cases. 

Content for the general/family practice subset was initially provided by the SNOMED International's General/Family Practice and ICPC-2 mapping project group. It is designed for use in general/family practice clinical settings within electronic health records (EHRs). 

4.1 Purpose of the GP/FP subset

To provide a subset of frequently used SNOMED CT concepts for use in general/family practice EHRs within the following data fields:

  • Reason for encounter
  • Health issue

4.2 Some example use cases of the GP/FP subset

4.2.1 Data entry – direct entry of SNOMED CT concepts from the GP/FP subset

During an encounter in the general/family practice, a GP/FP sees a patient who has presented with a newly identified health issue. The GP/FP enters the new health issue into the data field for 'health issue', and into a problem list (if appropriate) in the patient's EHR using the GP/FP subset that has been incorporated in the patient's EHR by the EHR software vendor. The GP/FP is presented with a validated list of potential terms from the subset, from which GP/FP selects the SNOMED CT concept that best represents the patient's health issue.

4.2.2 Electronic transfer of care (referrals, admissions, handovers, discharge)

A GP/FP wishes to transfer the care of a patient to a medical specialist for further investigation. The GP/FP's EHR contains the SNOMED CT GP/FP subset, and the GP/FP has entered all the patient's health issues into the EHR using the subset. An HL7 referral message is then constructed; containing SNOMED CT coded concepts from the patient's problem list. The message is sent electronically to the specialist who populates his/her EHR using the data contained in the message. This reduces the time needed to take a patient history and enter this data into the specialist's EHR.

4.2.3 Constraint of terminology use for population and sub-population analysis

A group of GPs are interested in comparing aspects of care across populations of GPs and their patients. The adoption of a subset will, to an extent, constrain the variability of coding of similar issues, conditions and situations that may confound data analysis where very large terminologies such as SNOMED CT are used without constraint.

4.3 Obtaining the GP/FP subset

Access within SNOMED International member countries is provided by the Member National Release Centre in each country, via the relevant Member page. Affiliates of SNOMED International in non-member countries can access the table through their Member Licensing and Distribution Service (MLDS) account. Please contact info@snomed.org for more information if required. 

4.4 Benefits of the subset

SNOMED CT is regarded as the leading global clinical terminology for use in EHRs. The GP/FP subset utilises the power of SNOMED CT by refining the subset to a list of concepts specific to those commonly used in General/Family practice, in this way assuring and enabling a SNOMED CT encoded system for recording aspects of the clinical record. This increases the usefulness of SNOMED CT for GPs/FPs because searches are targeted to the SNOMED CT concepts that GPs/FPs use most often, and, if implemented properly, users should be able to search and select a SNOMED CT concept quickly and easily. 

As stated in Section 4.5, the SNOMED CT GP/FP subset is being maintained and distributed on an annual basis and in line with the July edition of the SNOMED CT International Release. 

4.5 Characteristics of the GP/FP subset

The GP/FP Subset contains the following characteristics:

  • Only concepts with a status of 'current' (status = 0) have been included, ensuring that the only concepts included are active and able to be used for data entry.
  • The Reason for encounter and Health issue subsets have been combined into one subset.
  • A series of principles for the development of the GP/FP subset were created during the development phase of the project. These principles are documented in the SNOMED CT GP/FP subset and ICPC mapping project: Phase 2 project report.

  • The GP/FP subset is released using Release Format 2 (RF2).

4.6 SNOMED CT target content

The GP/FP subset only contains SNOMED CT content from the following hierarchies:

    • Clinical finding
    • Event
    • Procedure
    • Situation with explicit context.

4.7 Known issues in the GP/FP subset

The GP/FP subset was developed using a 'bottom-up' approach, based on the terms frequently used in general/family practice to describe reasons for encounter and health issues. As a result, it does not contain all the SNOMED CT concepts that could be used to populate the reasons for encounter or health issue data fields in electronic health records. The IFP/GP Clinical Reference Group will add to the content of the subset based on usage in Family/General Practice. 

5 Implementation of the GP/FP Subset 

5.1 Implementation overview

  • There are a variety of ways in which the GP/FP subset can be implemented, and it would be impossible to outline each possible scenario in these release notes.
  • Vendors are encouraged to contact the IFP/GP Clinical Reference Group to discuss specific implementation scenarios at info@snomed.org.
  • Background about the creation and maintenance of subsets can be found by contacting info@snomed.org
  • The subset should be implemented in SNOMED CT enabled systems in order to access both additional content and also enable the power of SNOMED CT for retrieval and use of the information stored in systems. 

5.2 Use of a secondary search mechanism

The GP/FP Subset contains concepts that are commonly used by GPs/FPs on an international basis, offering initially the SNOMED CT concepts they are likely to use frequently. However, rare conditions are managed in general/family practice, and GPs/FPs will often need to access a wider source of SNOMED CT concepts to populate their reasons for encounter or health issues and this should be possible in a SNOMED enabled system.
For this reason, when implementing the GP/FP Subset vendors are strongly encouraged to implement a two-stage search mechanism, where users search for concepts in the GP/FP Subset in the first instance. Then, if a suitable concept cannot be found in the GP/FP Subset, a 'secondary search' is activated, allowing the search to be repeated using a broader set of relevant SNOMED CT concepts.

6 Effective Date and Maintenance

6.1 Effective date

The subset is aligned to the July 2022 SNOMED CT International Release.  The effectiveTime for the content has therefore been set to 20220731 (31st July 2022). 


6.2 Maintenance of the subset and ICPC-2 map

The ICPC-2 map files have been deprecated as part of the GP/FP release package from the July 2019 publication onwards, as publicised in the General Practitioner/Family Practitioner (GP/FP) Reasons for Encounter/Health Issues SNOMED CT package Release Notes - July 2019.

7 Technical Notes

7.1 RF2 package format

The RF2 package convention dictates that it contains all relevant files, regardless of whether or not there is content to be included in each particular release.  Therefore, the package contains a mixture of files which contain both header rows and content data, and also files that are intentionally left blank (including only a header record).  The reason that these files are not removed from the package is to draw a clear distinction between:

  1. ...files that have been deprecated (and therefore removed from the package completely), due to the content no longer being relevant to RF2 in this or future releases, and 
  2. ...files that just happen to contain no data in this particular release (and are therefore included in the package but left blank, with only a header record), but are still relevant to RF2, and could therefore potentially contain data in future releases.

This allows users to easily distinguish between files that have purposefully been removed or not, as otherwise if files in option 2 above were left out of the package it could be interpreted as an error, rather than an intentional lack of content in that release.

7.2 RF2 package file naming convention

The file package naming convention has been updated to remove the references to the now inactivated ICPC-2 map records.  The GP/FP packages now follows the following naming convention:

  • SnomedCT_GPFP_PRODUCTION_[date/time].zip

7.3. RF2 Delta files removed from the package

Delta files have been removed from both International and Managed Service release packages, and are now being removed from all Derivative products in line with this new Standard.

The Delta files have therefore been removed from this 2022 GP/FP Release package.  Please contact support@snomed.org if you have any questions about these improvements.



Approvals


Final Version

Date

Approver

Comments

1.0

20221029

Jane MillarApproved
1.0

20221028

Cathy RichardsonApproved





Download .pdf here:





Draft Amendment History


Version

Date

Editor

Comments

0.1

03/10/2022 

Andrew AtkinsonInitial version
1.0

20221028

Cathy RichardsonFinal updates


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